PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027349881.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 349aa MW: 38932.5 Da PI: 9.0836

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027349881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	103.3	4.1e-32	50	158	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.........seceaesssssasnsss 87 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk i+WLl++ak +i+el+ ++++++ s++++++ sss+s++++ XP_027349881.1 50 FGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLNAAKNEIDELPPLPNIPQvnnftlgypSAVTSNEASSSHSQPNE 144 689*************************************************************7777765433333322233333333333333 PP TCP 88 g............k 89 + XP_027349881.1 145 QlfninrsiqyweG 158 34455555555541 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MIKSPKEADF PLKQEGHSHS SDHEKTKTSS SSAQWPRLKN PRIVRVSKAF GGKDRHSKVC 60 TIRGLRDRRV RLSVPTAIQL YDLQDRLGLS QPSKVIDWLL NAAKNEIDEL PPLPNIPQVN 120 NFTLGYPSAV TSNEASSSHS QPNEQLFNIN RSIQYWEGPS QNSLWKLKPK VSGEVISTEK 180 ENWANRSVED KQEAIEGPNA HVLPNNLLSR ANHPSFLGLL NTMPHGYHWE LSSGDVSHQL 240 GNNGFTNQTD IHNTNIVPFP STLSLSTGNS QILVCPPGAT QPYFPSHVTA MDMDPRQINH 300 YQMLNSSSQN PLTNSLNHSF CLAMMTHKSL HSSNSSKSPS QKDQEFPPK

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MIKSPKEADF PLKQEGHSHS SDHEKTKTSS SSAQWPRLKN PRIVRVSKAF GGKDRHSKVC  60
TIRGLRDRRV RLSVPTAIQL YDLQDRLGLS QPSKVIDWLL NAAKNEIDEL PPLPNIPQVN  120
NFTLGYPSAV TSNEASSSHS QPNEQLFNIN RSIQYWEGPS QNSLWKLKPK VSGEVISTEK  180
ENWANRSVED KQEAIEGPNA HVLPNNLLSR ANHPSFLGLL NTMPHGYHWE LSSGDVSHQL  240
GNNGFTNQTD IHNTNIVPFP STLSLSTGNS QILVCPPGAT QPYFPSHVTA MDMDPRQINH  300
YQMLNSSSQN PLTNSLNHSF CLAMMTHKSL HSSNSSKSPS QKDQEFPPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.2	3e-48	TCP family protein