PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027349388.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 654aa    MW: 72893.5 Da    PI: 6.4221
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027349388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B380.41.8e-25133234199
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+k+ltpsd++++g +++pk++a+++     +  ++ +++l+ +d++g +W +++iyr++++r++lt+GW+ Fv++++L +gD+++F   + +++
  XP_027349388.1 133 FCKILTPSDTSTHGGFSIPKRHADDCfrpldMTHPTPTQDLVAKDLHGFEWHFRHIYRGQPKRHLLTSGWSTFVNSKKLVAGDSCIFV--SGENG 225
                     99****************************9444555679************************************************..44999 PP

                     ..EEEEE-S CS
              B3  91 elvvkvfrk 99 
                     e +++++r+
  XP_027349388.1 226 EIRIGIRRA 234
                     99***9986 PP
2Auxin_resp94.32e-31261342182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                     a+ha++++s+F+v+++P++ + eF++++++++k++  ++s+GmR++m +e e+s++ r++Gt+++++d+d +rWp+S+Wr+ 
  XP_027349388.1 261 ASHAVNSGSMFTVYFRPWTNPYEFIIPLQNYMKSIALNYSIGMRVQMLYEVEESARSRYAGTIIAIEDIDKIRWPGSEWRCF 342
                     689*****************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    
MRRKRDMDAA AIDALCHEQG ANDDLYGALW RACAGASVYV PSIGEKVLYF PQGHLEQVAA  60
FAQHQQDGHM EIPVFDLPSK ILCKVIGVQL KAEPYTDEVF AQVTLLPQLK QDDFNLDEED  120
NIQTSRRNSI YSFCKILTPS DTSTHGGFSI PKRHADDCFR PLDMTHPTPT QDLVAKDLHG  180
FEWHFRHIYR GQPKRHLLTS GWSTFVNSKK LVAGDSCIFV SGENGEIRIG IRRAMKHHSN  240
VSTSSSLISG HSMQLGILTS ASHAVNSGSM FTVYFRPWTN PYEFIIPLQN YMKSIALNYS  300
IGMRVQMLYE VEESARSRYA GTIIAIEDID KIRWPGSEWR CFKVQWDAVL DACLRPERVC  360
PWWIDPLESV NEKRIPIFPI PNKTHVLNPR PLPGLSGVAV EDIIQNSAQL ASQRVDRDLQ  420
GQDYIGACSS QPIRCSQFGK NQLPIPMQDP LHHSLGSSMS SPYEDLSTSS TILNSTGFDS  480
QGCHSSESKD ENDVPFGQPG SYSRYKLFGV SLIDNQPELP SPQFAALSKT SSPLSSHPTC  540
VTSGKTCKKC RFVSRSCTKV LKLGTALGRA VDLSRFPGYD ELISELDSMF DFGGSLINGS  600
SGWQVTCIDD DGDMMLLGDY PWQDFQSMVQ KMIICPKDGI NNLNPSSSTD PRNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.11e-146ARF family protein