PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348493.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 369aa MW: 40902 Da PI: 4.8054

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.1	1.2e-11	191	236	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++Er+RR+++ ++f L l+P + kK++Ka++L A++Y+k+L XP_027348493.1 191 DHIMAERKRREKLSQSFIALAALVPGL-----KKMDKASVLGDAIKYVKEL 236 699**********************.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MEDLNTPMDA SATSWLSDLD MDDYNLFPEE CPLNFLDVDE EEFLSHDIAT ALPDQTLHQS 60 LSSECTSKTL SNNSSTDETS FDFERPSKML KTISTSSNSS TITNLSPSSS FSSFQSQILS 120 FDNPKPSLSE TNHFYGFDCT LNPPQNEMVS VSTPQLGNQR FPTQNPKGSP KNQNLETKTS 180 HSKRSPAHAQ DHIMAERKRR EKLSQSFIAL AALVPGLKKM DKASVLGDAI KYVKELKERL 240 AVLEEQSKKT RAESVVVVNK PELSGDDDSS SCDESIDADG GSELLFQVEV RVSGQEMLLR 300 IHCQKQKGLL VKILAQIQTY HLLVVNSSVL PFGDSILDIT IVAQMGDDYR LTTKELVKNL 360 RVAALKIMS

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MEDLNTPMDA SATSWLSDLD MDDYNLFPEE CPLNFLDVDE EEFLSHDIAT ALPDQTLHQS  60
LSSECTSKTL SNNSSTDETS FDFERPSKML KTISTSSNSS TITNLSPSSS FSSFQSQILS  120
FDNPKPSLSE TNHFYGFDCT LNPPQNEMVS VSTPQLGNQR FPTQNPKGSP KNQNLETKTS  180
HSKRSPAHAQ DHIMAERKRR EKLSQSFIAL AALVPGLKKM DKASVLGDAI KYVKELKERL  240
AVLEEQSKKT RAESVVVVNK PELSGDDDSS SCDESIDADG GSELLFQVEV RVSGQEMLLR  300
IHCQKQKGLL VKILAQIQTY HLLVVNSSVL PFGDSILDIT IVAQMGDDYR LTTKELVKNL  360
RVAALKIMS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	196	201	ERKRRE
2	197	202	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-55	bHLH family protein