PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348452.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | GATA | ||||||||
Protein Properties | Length: 153aa MW: 17290.7 Da PI: 9.1131 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 36.2 | 8.1e-12 | 6 | 29 | 9 | 32 |
GATA 9 TplWRrgpdgnktLCnaCGlyyrk 32 TplWR+gp+ ++ LCnaCG +yr XP_027348452.1 6 TPLWRNGPEEKPVLCNACGSRYRI 29 9*******99999*********95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MVSPGTPLWR NGPEEKPVLC NACGSRYRIW GSLDDYLPKH FQPEHLSNLE KLMPGSSLNV 60 KNIIPSSDDP DSDEKDSSLW NPKVPSKKRS RVVYERITPM KRFHKRLLSM WKHGKPNESS 120 PEEVLLYHNV NNFIPSGEIG LGAVLLKPDG TST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47140.1 | 1e-13 | GATA family protein |