PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348239.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 26661.7 Da PI: 6.3933 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.8 | 1.1e-17 | 63 | 113 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ ++Wv+eIr+p +k+ r+++g++ t+e+Aa+a++ a ++l+g XP_027348239.1 63 PVYRGVRQRN-GNKWVCEIREP---NKKSRIWVGTYTTPEMAARAHDVAVLALRG 113 68*****999.9*********9...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MDFEYNECPN FTSQSSSSTF ISHKLSAPPN PTPLWDSSNP QTSNNISSKR KAGRKKFKET 60 RHPVYRGVRQ RNGNKWVCEI REPNKKSRIW VGTYTTPEMA ARAHDVAVLA LRGTSAKFNF 120 PDSAFLLPLP NSCSPSDIRA AAAKANATFS SSHNNSRVVD TEDPCLVEGN SHKSVLNISM 180 QDVEGALHHD NDAFLDEEAL YNMPGLLDSM AEGLIITPPS MTRAMDSEDN GCQIDLTLWT 240 D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 3e-53 | ERF family protein |