PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348187.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 460aa MW: 50532.8 Da PI: 9.3052

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	9.1e-05	58	78	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk F r nL+ H r H XP_027348187.1 58 CETCGKGFQRDQNLQLHRRGH 78 *******************88 PP
2	zf-C2H2	13.5	0.00021	132	154	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_027348187.1 132 WKCEKCSKRYAVQSDWKAHSKTC 154 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MDEGEITNGF PPNPTGAASN KNPPVLKRKR NLPGNPDPEA EVIALSPKTL MATNRFLCET 60 CGKGFQRDQN LQLHRRGHNL PWKLKQRTSK EARKRVYVCP EKTCVHHDPS RALGDLTGIK 120 KHFCRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYK CDCGTIFSRR DSFITHRAFC 180 DALAEETARV NAASDMNTSL GGNIGYNIMG TPSLGPNMAT HFSSIFKPVS SIDETTNPTS 240 KGLSLWMGQT SSQAQETMAN GNLREIHQLE ISTTNSETIY CGTPLVQSSN LPPSNYHLNW 300 VFGTKLSSNN SQELTSNTTS LPLGNNTSVP SLYSSQHQPH QTSSLANMSA TALLQKAAQI 360 GATSSDPLWL GSLGLKCSYN QGQDGDNKFS MYGSSLVLTS VGNKAENSAC DLSQMLHAKR 420 RHVQNEENGG GQTRDFLGVG VQTICHPLSI KGRKRWELSA

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MDEGEITNGF PPNPTGAASN KNPPVLKRKR NLPGNPDPEA EVIALSPKTL MATNRFLCET  60
CGKGFQRDQN LQLHRRGHNL PWKLKQRTSK EARKRVYVCP EKTCVHHDPS RALGDLTGIK  120
KHFCRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYK CDCGTIFSRR DSFITHRAFC  180
DALAEETARV NAASDMNTSL GGNIGYNIMG TPSLGPNMAT HFSSIFKPVS SIDETTNPTS  240
KGLSLWMGQT SSQAQETMAN GNLREIHQLE ISTTNSETIY CGTPLVQSSN LPPSNYHLNW  300
VFGTKLSSNN SQELTSNTTS LPLGNNTSVP SLYSSQHQPH QTSSLANMSA TALLQKAAQI  360
GATSSDPLWL GSLGLKCSYN QGQDGDNKFS MYGSSLVLTS VGNKAENSAC DLSQMLHAKR  420
RHVQNEENGG GQTRDFLGVG VQTICHPLSI KGRKRWELSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-148	C2H2 family protein