PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348177.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 272aa MW: 30303.6 Da PI: 9.3462

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.1	8.8e-15	86	132	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr+++P a kK++Ka+ L +A++++k+L XP_027348177.1 86 KSHSEAERRRRARINAHLDTLRSVIPGA-----KKMDKASLLGEAIKHLKEL 132 58***********************9.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MTKNQTVPSP SFQAVEMEAF DWGYDIHRDA SKGNISGFEV KNGVIGSGYG SSFSLVLDRE 60 RGVLVEAPVK LERKGVSTER SIEALKSHSE AERRRRARIN AHLDTLRSVI PGAKKMDKAS 120 LLGEAIKHLK ELKKKATQAS EGLMIPEDND EISVEEQEGG LNGFPYSIRV SLSCEYKPGL 180 LSDIRQALDA LDLMIMRADI ATLEGRMKNV FVIISCKEQN FKDATYRQFL AGSVHQALRS 240 VLNRFSVSHD ILGTRKRRRV SIFGSSSLED FL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	255	259	RKRRR
2	256	260	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	1e-29	bHLH family protein