PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347959.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 421aa MW: 46794.6 Da PI: 8.2616

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15	4.4e-05	286	323	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +r+ +++++L++l+ + +K s a++L +A+ YI L XP_027347959.1 286 RKERLGDRIQTLQRLVAPF-----GKTSTASVLSEAIGYILFL 323 7788999********98.....8*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MEFSSFHLQH QLQEESAQCI ASATPPSLYK PSTTTSQSWI PSTIYNGSTS GFITGSFNNS 60 RELGHKHTMI DSLRISTGQA YGFHNGKSFT QRPASDDLFP AKIKGEMNRS SSKSMNESCS 120 LISTHEPQHS PSFLSNISVT GEEFFPEEEE HHVHKPIDGI DGGMALTKRY NFGDVSSNLP 180 TLDMSSSIVS CSLGLNHQAL GLHTSYNNGS YGLQPCYDTF GLNEAISLSH RNMHGLESSP 240 TNSSQKISSF TSEVAMKKRS SCCSLPKEYE GKAKKSRSSC PSLKVRKERL GDRIQTLQRL 300 VAPFGKTSTA SVLSEAIGYI LFLRQQIQRL GLAEGLETIE NGKTQERINE LRLYIFLRYL 360 YALCSLQTLS IPYMKSAQNK PSRMVQLESN EDESREFKPD LRSRGLCLVP LSYASFINRC 420 S

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MEFSSFHLQH QLQEESAQCI ASATPPSLYK PSTTTSQSWI PSTIYNGSTS GFITGSFNNS  60
RELGHKHTMI DSLRISTGQA YGFHNGKSFT QRPASDDLFP AKIKGEMNRS SSKSMNESCS  120
LISTHEPQHS PSFLSNISVT GEEFFPEEEE HHVHKPIDGI DGGMALTKRY NFGDVSSNLP  180
TLDMSSSIVS CSLGLNHQAL GLHTSYNNGS YGLQPCYDTF GLNEAISLSH RNMHGLESSP  240
TNSSQKISSF TSEVAMKKRS SCCSLPKEYE GKAKKSRSSC PSLKVRKERL GDRIQTLQRL  300
VAPFGKTSTA SVLSEAIGYI LFLRQQIQRL GLAEGLETIE NGKTQERINE LRLYIFLRYL  360
YALCSLQTLS IPYMKSAQNK PSRMVQLESN EDESREFKPD LRSRGLCLVP LSYASFINRC  420
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	3e-31	bHLH family protein