PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347839.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 425aa MW: 46538.2 Da PI: 8.9697

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347839.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.5	4.9e-05	22	43	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++C+k Fs+ L H+r H XP_027347839.1 22 MCHICNKGFSSGKALGGHMRIH 43 7*******************99 PP
2	zf-C2H2	17.1	1.5e-05	76	97	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C C ksFs+ +L H+r+H XP_027347839.1 76 TCYLCRKSFSSMKSLFAHMRSH 97 699******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MKKGPGAGVS AGLDNNEHHS WMCHICNKGF SSGKALGGHM RIHNISRKQV HKAKQGTTSA 60 AKTKAKTWVL MSGNPTCYLC RKSFSSMKSL FAHMRSHPQR LRKVFQPHNN TPKNVASSNS 120 TSSSTLSDDS AVDLSQALWG WSVTAKRGRR SLSCGTVNSG LEHHGIEQRM QEAVYELMLL 180 ASGNPKRGEK VAGDNKVELS PVSLSKKLKV EAKSLNKMGF EEELLKSSFG NCDGSTDMKN 240 KNRKRKRETK RMELTELKTA EEDKKLVRSR ISNATFPSNI ALEGHLSNHK NSKNIQIMDE 300 LETDGVSATE EEEETAMQVD ETGTAVGCCT VESMTGHQCK IFNKTLSMGQ VSGDHKRSHW 360 TGMAEAHSAQ ATSPVEDGQN CSNILSFDLN QYPAMDDEVG VQSDLSIPSN IMTSSSYGSS 420 SQNSY

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MKKGPGAGVS AGLDNNEHHS WMCHICNKGF SSGKALGGHM RIHNISRKQV HKAKQGTTSA  60
AKTKAKTWVL MSGNPTCYLC RKSFSSMKSL FAHMRSHPQR LRKVFQPHNN TPKNVASSNS  120
TSSSTLSDDS AVDLSQALWG WSVTAKRGRR SLSCGTVNSG LEHHGIEQRM QEAVYELMLL  180
ASGNPKRGEK VAGDNKVELS PVSLSKKLKV EAKSLNKMGF EEELLKSSFG NCDGSTDMKN  240
KNRKRKRETK RMELTELKTA EEDKKLVRSR ISNATFPSNI ALEGHLSNHK NSKNIQIMDE  300
LETDGVSATE EEEETAMQVD ETGTAVGCCT VESMTGHQCK IFNKTLSMGQ VSGDHKRSHW  360
TGMAEAHSAQ ATSPVEDGQN CSNILSFDLN QYPAMDDEVG VQSDLSIPSN IMTSSSYGSS  420
SQNSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56200.1	1e-09	C2H2 family protein