PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347827.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family bHLH
Protein Properties Length: 300aa    MW: 33841.1 Da    PI: 4.7572
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.54.1e-07136167743
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaei 43 
                     + ErrRR r+++++ +Lr+l+P+      +K++Ka+i
  XP_027347827.1 136 ISERRRRGRMKEKLYTLRSLVPNI-----TKMDKASI 167
                     68*********************6.....69999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDKMDFDQET LVHINDFELH NFVEDPNLDQ FINLIRGDNN DTICNFNSEL INDCFIDNSI  60
LSYPSIPFDQ CKSDSVNVYD PSSTTLSSFS CFDGEAKGGE EENDMEDSSA ITITTTATKS  120
ITTKPRRKTD RSMTLISERR RRGRMKEKLY TLRSLVPNIT KMDKASIIAG LETSLLMSKN  180
YQGSGENPIN FQFTNNSLSI CNCKKIIQMD MFQVDERGFY VKIVSSKGEG VAASLYRSLE  240
SLTGFNVQNS NLATLRDSFQ LTFSLNAKGS EPEINLPNLK LRVTGAFMNQ GFEFIPFFHA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126142RRKTDRSMTLISERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-77bHLH family protein