PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347763.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 345aa MW: 38578.6 Da PI: 4.7227

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.5e-12	177	220	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L XP_027347763.1 177 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 220 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MELSQLGFLE ELVAPRRDTW NALSTGLSDL FPSGCWSFDS FIENPSLATS TIPFAAFSAP 60 IDPRFDCPYS NEAAAAYPFG HDDGFTIMPE LHTSYTRNVD NDPPPPLPLH QDNPLVKDEE 120 IGFVRSDDKS LDERKSVCKV EEQQQGTDVQ VFNIGICDDG ERKPKSKKVE GQPSKNLMAE 180 RRRRKRLNDR LSMLRSIVPK ISKMDRTSIL GDTIDYMKEL LERVGKLQEE EGAEGSSQIS 240 LFDISKEQLK PNEAIVRNSP KFDVERRDKD TRISICCATK PGLLLSTVNT LEALGLEIQQ 300 CVISSFNDFA MEASCSEVAA QRNCICPEEI KQALFRNAGF GGRCV

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MELSQLGFLE ELVAPRRDTW NALSTGLSDL FPSGCWSFDS FIENPSLATS TIPFAAFSAP  60
IDPRFDCPYS NEAAAAYPFG HDDGFTIMPE LHTSYTRNVD NDPPPPLPLH QDNPLVKDEE  120
IGFVRSDDKS LDERKSVCKV EEQQQGTDVQ VFNIGICDDG ERKPKSKKVE GQPSKNLMAE  180
RRRRKRLNDR LSMLRSIVPK ISKMDRTSIL GDTIDYMKEL LERVGKLQEE EGAEGSSQIS  240
LFDISKEQLK PNEAIVRNSP KFDVERRDKD TRISICCATK PGLLLSTVNT LEALGLEIQQ  300
CVISSFNDFA MEASCSEVAA QRNCICPEEI KQALFRNAGF GGRCV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	187	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	8e-86	bHLH family protein