PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347721.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 318aa MW: 36314.1 Da PI: 8.0681

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	1.9e-05	155	174	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+k+F+r n++ H+ XP_027347721.1 155 FACSICSKTFNRYNNMQMHM 174 78*****************9 PP
2	zf-C2H2	16.2	3e-05	239	261	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F k + ++H +++ XP_027347721.1 239 FMCRKCGKTFAVKGDWRTHEKNC 261 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MGFMECNVED NKNLYLHTPT FIEWLKPCPS PSYPNSLSSS SSSSSSSSSF TQNELVQETI 60 QFLPVLSEKA SKDEDHGVKM EGFEVKEENI EQVTVALHIG LPHTRGDADV DEKKIFLVKE 120 EEESSKRSFH GCTFNQERRF WIPTPAQILV GPMQFACSIC SKTFNRYNNM QMHMWGHGSE 180 YRKGPDSLKG TQPAAMLRLP CYCCAEGCKN NINHPRAKPL KDFRTLQTHY KRKHGTKPFM 240 CRKCGKTFAV KGDWRTHEKN CGKLWYCTCG SDFKHKRSLK DHIRSFGKGH NPLPPFKAFE 300 DEKECITGSD EDEVNAHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-117	C2H2 family protein