PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347675.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 493aa    MW: 55982.3 Da    PI: 5.2217
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS352.27.8e-1081194923374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     ++Lle A+a+++++ +++++lL+ l+el+sp gd+ q+laayf +AL +r+++ ++++y++l++ ++++ + +++ +++  f+evsP+ +f+h++
  XP_027347675.1 119 NVLLETARAIADNNSNRVHHLLWMLNELSSPFGDTDQKLAAYFFQALFSRVTDAGDRTYRTLASASDKTCSFESTRKMVLKFQEVSPWTTFGHVA 213
                     689***********************************************************9888886665555555556************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak.rledl 189
                      N aIlea+eg++++Hi+D++ ++++QWp+Ll+aLa+R++++p+lR+T+v+  ++g   ++ ++e+g r++kfA+ +gvpf+fnv+++  +l++l
  XP_027347675.1 214 SNGAILEALEGNSKLHIVDISNTYCTQWPTLLEALATRTDETPQLRLTTVVTGRPGnsLQRVMKEIGTRMEKFARLMGVPFKFNVVHHAgDLSEL 308
                     **************************************************998888778999***********************97767***** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklprese 280
                     +l++L++k++EalaVn+v +lh++     ++ ++rd +++ + +l+P++v+vve+ead++ +    +F+++f e+l+++ + f++l+++++r+s+
  XP_027347675.1 309 NLSQLDIKEDEALAVNCVNALHSVS----AVGNNRDVLISSFHGLQPRIVTVVEEEADLDVGfegyEFVKGFEECLRWFRVYFEALDESFARTSN 399
                     ************************8....66777999*******************99865555669**************************** PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaWr 374
                     er ++Er+  gr+iv++vac+ ae++er+et+ +W +rl+  G+++vp+se++ +++++llr++k dg+++  ++++ ++l Wk++p+v++SaWr
  XP_027347675.1 400 ERLMLERA-AGRAIVDLVACSPAESVERRETATRWGMRLHGGGLNAVPFSEEVCDDVRALLRRYK-DGWSMAqCSDAGIFLSWKEQPVVWASAWR 492
                     ********.********************************************************.77555428888899**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    
MDTLFRLVNF QQQQQQQQPD PSLNSTTSRT SSSSRSSRQN YHYYSQQEDE ECFNFYMDEE  60
DLSSSSSKHY YHYQPHPHVS TTFNTNTSTP TTTTDYSFSP SPLPDFNFNF DFSTNWSHNV  120
LLETARAIAD NNSNRVHHLL WMLNELSSPF GDTDQKLAAY FFQALFSRVT DAGDRTYRTL  180
ASASDKTCSF ESTRKMVLKF QEVSPWTTFG HVASNGAILE ALEGNSKLHI VDISNTYCTQ  240
WPTLLEALAT RTDETPQLRL TTVVTGRPGN SLQRVMKEIG TRMEKFARLM GVPFKFNVVH  300
HAGDLSELNL SQLDIKEDEA LAVNCVNALH SVSAVGNNRD VLISSFHGLQ PRIVTVVEEE  360
ADLDVGFEGY EFVKGFEECL RWFRVYFEAL DESFARTSNE RLMLERAAGR AIVDLVACSP  420
AESVERRETA TRWGMRLHGG GLNAVPFSEE VCDDVRALLR RYKDGWSMAQ CSDAGIFLSW  480
KEQPVVWASA WRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein