PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347576.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 299aa MW: 34031.7 Da PI: 7.9994

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.7	2.1e-13	97	148	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r +h +Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ XP_027347576.1 97 QRITHITVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 148 799*************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MALETLSSNE FSNFIIYDTI SATPFSSHDS SEASFLENLV NYQEQEPAFD NCAMRTRKRQ 60 NSELETIGRK QNVVVQGRKK RRRKPRVCKN KEEAETQRIT HITVERNRRK QMNEHLAVLR 120 SLMPESYVQR GDQASIVGGA IEFVKELEHL LQSLEARKLQ LLQQEVAQTN EDTAISKLMQ 180 PPFAQFFVYP QYTWSQAPNK YTSKTKAAIA DIEVTLIETH ANLRILTRRS PGQLTKLVSG 240 FQTLYLTILH LNVTTIDPLV FYSISAKVEE GFQLGSVDGI STAVHHLLGR IEEEASLCC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	84	RKKRRRK
2	78	85	RKKRRRKP
3	79	84	KKRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	6e-72	bHLH family protein