PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027347530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | SBP | ||||||||
Protein Properties | Length: 144aa MW: 16793.4 Da PI: 7.4726 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 135.9 | 1.2e-42 | 63 | 138 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv++C+adlseak+yhrrhkvCe h+kap+v ++gl+qrfCqqCsrfhe+sefD++krsCrrrLa+hnerrrk++ XP_027347530.1 63 CQVNNCDADLSEAKQYHRRHKVCEYHAKAPSVHIAGLQQRFCQQCSRFHEVSEFDDSKRSCRRRLAGHNERRRKNA 138 **************************************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MDTGRSEGKR TLRYKEEEDE EEEEEEEINE MGFGEDGRRN KRVMRDLCGK RGSKGGSSMP 60 PSCQVNNCDA DLSEAKQYHR RHKVCEYHAK APSVHIAGLQ QRFCQQCSRF HEVSEFDDSK 120 RSCRRRLAGH NERRRKNAVD YHGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 1e-42 | SBP family protein |