PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347258.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 503aa MW: 55666.2 Da PI: 6.1976

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347258.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.4e-12	312	355	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + E++RR+++N ++ Lr+l+P++ +K++ a+++ A+eYIk+L XP_027347258.1 312 FATEKQRREQLNGKYKILRSLIPNP-----TKMDRASVVGDAIEYIKEL 355 578********************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MSTGDRPKMH EQTGCFDPNT MAESVTVTSQ KDNFPLAEPV APSSMVAGNT TNSNNNSLQE 60 NLRLSVEELS YHHHNPQHPE DVSNLANGVS ATTIDTPHPQ HLGLNNNMDN HLVQEVIDAF 120 SYQQSTWDPS VQELQDMGYA NHSQHQSHEQ QFQQIEAQNC SQNYNPSSIL DPPYPSPDLL 180 NLLHLPRCSA SSLLTNPTSC ITNPTQKAPN FHNSMGFLGD LPIGSDNTSA SSVLYDPLFH 240 LNLPPQPPAL RELFQSLPRG YSLPTSSRNG SLFGGGDEID GDGSQLDMGV LKFNKVAASV 300 GKGRRGKAAK PFATEKQRRE QLNGKYKILR SLIPNPTKMD RASVVGDAIE YIKELMRTVN 360 ELKLLVEKKR YGKERCKRHQ AEDDAAESCN LPFGDPDGCI RTSWLQRKSK DSEVDVRIID 420 DDVTVKLFQR KKINCLLCVS KVLDELQLEL HHVAGGHVGE YCSFLFNSKI TEGSSVYASA 480 IANRVIDVLD TQYTASVPHA NSY

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MSTGDRPKMH EQTGCFDPNT MAESVTVTSQ KDNFPLAEPV APSSMVAGNT TNSNNNSLQE  60
NLRLSVEELS YHHHNPQHPE DVSNLANGVS ATTIDTPHPQ HLGLNNNMDN HLVQEVIDAF  120
SYQQSTWDPS VQELQDMGYA NHSQHQSHEQ QFQQIEAQNC SQNYNPSSIL DPPYPSPDLL  180
NLLHLPRCSA SSLLTNPTSC ITNPTQKAPN FHNSMGFLGD LPIGSDNTSA SSVLYDPLFH  240
LNLPPQPPAL RELFQSLPRG YSLPTSSRNG SLFGGGDEID GDGSQLDMGV LKFNKVAASV  300
GKGRRGKAAK PFATEKQRRE QLNGKYKILR SLIPNPTKMD RASVVGDAIE YIKELMRTVN  360
ELKLLVEKKR YGKERCKRHQ AEDDAAESCN LPFGDPDGCI RTSWLQRKSK DSEVDVRIID  420
DDVTVKLFQR KKINCLLCVS KVLDELQLEL HHVAGGHVGE YCSFLFNSKI TEGSSVYASA  480
IANRVIDVLD TQYTASVPHA NSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	3e-82	bHLH family protein