PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347250.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GATA
Protein Properties Length: 331aa    MW: 35778.9 Da    PI: 5.5775
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.21.9e-17236269134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_027347250.1 236 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 269
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MVGPNIIDDF FDHIDDLLEF PTEDPVTTAD ASTSSAAPVP PPANFWSSDS DSVFPVNTVP  60
DLSAELAVPY EDIVQLEWLS NFVEDSFSDG NLTMNRVEAP CSTKEDTANA QFQTSSPVSV  120
LESSSFCSGE KGAPRSPEIY IPVPCGRARS KRPRPATFNP HPVMHLISPA SSVGENTHLN  180
SATSKASSDS ENFAESHPVI KIPKQASAEH KKKKKTEVSF PSGGDQNLHS QAVRKCLHCE  240
ITKTPQWRAG PMGPKTLCNA CGVRYKSGRL FPEYRPAASP TFCAAMHSNS HKKVLEMRTK  300
TGNNAAFAAD ADADTPELIP NANSSLTVEY I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151155KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-40GATA family protein