PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347173.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 680aa MW: 75598.5 Da PI: 8.4478

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347173.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.8	2.5e-08	560	609	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ eE e lv+av+++G+g+W+ + + k+Rt ++k++w ++ XP_027347173.1 560 RRPFSVEEVEALVQAVEKMGTGRWRDVKLCAFdnaKHRTYVDLKDKWKTL 609 679***********************99999************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MVLQKRLDYG FNGCQVPAMP RASRSTRRRR KFQRRAEDNQ MRAFDLLATI ADKLLQEKEN 60 PTMSSDTSSE KDQRGFVKEC QDANKPSKSE LSDEGNCNKK CCSHLSSQTN NQNCCLKEFQ 120 HAELDGHPGI TSIVTSSSCL ERFFADKLVD GKSHIKMENF TSKVKLDFSG YPKDSHFKVD 180 GDTSKGKDGL HKTEKVPNGI GSAEDPLDEN PPAFISLGGN PKFSGYSDRI PCSSLSKACD 240 NVLVVSRDDD ENSSGCTHPS STKTKSLRVK TCIGDNRISK TLASKFRKVA EKSKDDTLSN 300 CDGDLKRTYH SKKNCNKRQN SQMNIPFKKR KLFNDACGSL PGTHKDPGIS SLEECQHQTI 360 RCRGSHVKLR IKSFRVPELF FEVPETSTIG SLKRTVMDAV TAVLGGELHI GVILQGKKVW 420 DDSKTLLQTG ISHDNQLDAL GFTLEPNSLQ SLPIVCAAHS LHPSADITQP VTRYPSSPAV 480 IHQRIQGNSD ILPEHQVTSL GSILESDHDS APSPINASVD EGTTDIKELV TVPEIDKEEL 540 AMVPVLQKPK RSEVIQRRIR RPFSVEEVEA LVQAVEKMGT GRWRDVKLCA FDNAKHRTYV 600 DLKDKWKTLV HTARISPQQR RGEPVPQELL DRVLVAHAYW SQQQAKQQPK QHPESALSLR 660 VLSATSDLVD GMGVLVSDCY

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MVLQKRLDYG FNGCQVPAMP RASRSTRRRR KFQRRAEDNQ MRAFDLLATI ADKLLQEKEN  60
PTMSSDTSSE KDQRGFVKEC QDANKPSKSE LSDEGNCNKK CCSHLSSQTN NQNCCLKEFQ  120
HAELDGHPGI TSIVTSSSCL ERFFADKLVD GKSHIKMENF TSKVKLDFSG YPKDSHFKVD  180
GDTSKGKDGL HKTEKVPNGI GSAEDPLDEN PPAFISLGGN PKFSGYSDRI PCSSLSKACD  240
NVLVVSRDDD ENSSGCTHPS STKTKSLRVK TCIGDNRISK TLASKFRKVA EKSKDDTLSN  300
CDGDLKRTYH SKKNCNKRQN SQMNIPFKKR KLFNDACGSL PGTHKDPGIS SLEECQHQTI  360
RCRGSHVKLR IKSFRVPELF FEVPETSTIG SLKRTVMDAV TAVLGGELHI GVILQGKKVW  420
DDSKTLLQTG ISHDNQLDAL GFTLEPNSLQ SLPIVCAAHS LHPSADITQP VTRYPSSPAV  480
IHQRIQGNSD ILPEHQVTSL GSILESDHDS APSPINASVD EGTTDIKELV TVPEIDKEEL  540
AMVPVLQKPK RSEVIQRRIR RPFSVEEVEA LVQAVEKMGT GRWRDVKLCA FDNAKHRTYV  600
DLKDKWKTLV HTARISPQQR RGEPVPQELL DRVLVAHAYW SQQQAKQQPK QHPESALSLR  660
VLSATSDLVD GMGVLVSDCY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53790.1	1e-61	MYB_related family protein