PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347171.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 685aa MW: 76290.4 Da PI: 8.7571

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347171.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.8	2.5e-08	565	614	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ eE e lv+av+++G+g+W+ + + k+Rt ++k++w ++ XP_027347171.1 565 RRPFSVEEVEALVQAVEKMGTGRWRDVKLCAFdnaKHRTYVDLKDKWKTL 614 679***********************99999************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MVLQKRLDYG FNGCQVPAMP RASRSTRRRR KFQRRAEDNQ MRAFDLLATI ADKLLQEKEN 60 PTMSSDTSSE KDQRGFVKEC QDANKPSKSE LSDEGNCNKK CCSHLSSQTN NQNCCLKEFQ 120 HAELDGHPGI TSIVTSSSCL ERFFADKLVD GKSHIKMENF TSKVKLDFSG YPKDSHFKVD 180 GDTSKGKDGL HKTEKVPNGI GSAEDPLDEN PPAFISLGGN PKFSGYSDRI PCSSLSKACD 240 NVLVVSRDDD ENSSGCTHPS STKTKSLRVK TCIGDNRISK TLASKFRKVA EKSKDDTLSN 300 CDGDLKRTYH SKKNCNKRQN SQMNIPFKKR KLFNGSYISS SNGFIGSRGI YYSPENCMNQ 360 DACGSLPGTH KDPGISSLEE CQHQTIRCRG SHVKLRIKSF RVPELFFEVP ETSTIGSLKR 420 TVMDAVTAVL GGELHIGVIL QGKKVWDDSK TLLQTGISHD NQLDALGFTL EPNSLQSLPI 480 VCAAHSLHPS ADITQPVTRY PSSPAVIHQR IQGNSDILPE HQVTSLGTTD IKELVTVPEI 540 DKEELAMVPV LQKPKRSEVI QRRIRRPFSV EEVEALVQAV EKMGTGRWRD VKLCAFDNAK 600 HRTYVDLKDK WKTLVHTARI SPQQRRGEPV PQELLDRVLV AHAYWSQQQA KQQPKQHPES 660 ALSLRVLSAT SDLVDGMGVL VSDCY

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MVLQKRLDYG FNGCQVPAMP RASRSTRRRR KFQRRAEDNQ MRAFDLLATI ADKLLQEKEN  60
PTMSSDTSSE KDQRGFVKEC QDANKPSKSE LSDEGNCNKK CCSHLSSQTN NQNCCLKEFQ  120
HAELDGHPGI TSIVTSSSCL ERFFADKLVD GKSHIKMENF TSKVKLDFSG YPKDSHFKVD  180
GDTSKGKDGL HKTEKVPNGI GSAEDPLDEN PPAFISLGGN PKFSGYSDRI PCSSLSKACD  240
NVLVVSRDDD ENSSGCTHPS STKTKSLRVK TCIGDNRISK TLASKFRKVA EKSKDDTLSN  300
CDGDLKRTYH SKKNCNKRQN SQMNIPFKKR KLFNGSYISS SNGFIGSRGI YYSPENCMNQ  360
DACGSLPGTH KDPGISSLEE CQHQTIRCRG SHVKLRIKSF RVPELFFEVP ETSTIGSLKR  420
TVMDAVTAVL GGELHIGVIL QGKKVWDDSK TLLQTGISHD NQLDALGFTL EPNSLQSLPI  480
VCAAHSLHPS ADITQPVTRY PSSPAVIHQR IQGNSDILPE HQVTSLGTTD IKELVTVPEI  540
DKEELAMVPV LQKPKRSEVI QRRIRRPFSV EEVEALVQAV EKMGTGRWRD VKLCAFDNAK  600
HRTYVDLKDK WKTLVHTARI SPQQRRGEPV PQELLDRVLV AHAYWSQQQA KQQPKQHPES  660
ALSLRVLSAT SDLVDGMGVL VSDCY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53790.1	6e-65	MYB_related family protein