PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347108.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 337aa    MW: 36624.1 Da    PI: 10.0199
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH35.22.1e-11185210227
                     -S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                     kte+Cr + +tG C+y ++C+FaHg+
  XP_027347108.1 185 KTEICRAWEETGNCRYDSKCQFAHGK 210
                     9***********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MENAWSNSKM KVLKLRTLHE NVPPLQIELD DRRGRYLQPT TMSPRFQPYT ENIDVGSPFA  60
RYFFAGSPLS GKVAPAGEAF TPPTFGSSKY RTAKVQPYCG NSSGSSSFGS RGRLSPSPLS  120
SIENLEIASL VSPSMYRTPV KGDDDVIVMD DILVRPMSGG KNGRSSSSSG RGSSSSSSTS  180
KSVLKTEICR AWEETGNCRY DSKCQFAHGK EELHPSRPSM KSKSGAQTSK SSIRAGSSLY  240
GPSSRIVRQQ GAVAEYVRMT LSQPTSPDLH HSRANFKTLN DWSPVDDGIE VFLPSNGSDK  300
TPSREEVNAY ISSIPHGVTA KRRLPVFAAL CLGQRSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.12e-08C3H family protein