PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347012.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 325aa MW: 35541.3 Da PI: 7.2045

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00075	148	170	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_027347012.1 148 YECKTCNRTFPSFQALGGHRASH 170 99**********99999998887 PP
2	zf-C2H2	13.1	0.00028	230	252	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H XP_027347012.1 230 HECSICGSEFTSGQALGGHMRRH 252 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MEMEGLDNND ATHNIAKGKR TKRLRLLSPC GVSAAATTVI MTSSCSSANS GASFSSTTTT 60 YDSADQEEED MANCLILLAQ GREGESYHHH HHHHPKDNNH DHNKQQGENH DHDYGDGNKI 120 EKGNASNRRF TEIANATANN TKVGFYIYEC KTCNRTFPSF QALGGHRASH KKPKLEEKKP 180 PLPPPPSSPH MNVVGNYDQF EEARGPPISL QLGNHGHRGF NGNNIKAKIH ECSICGSEFT 240 SGQALGGHMR RHRASSNTNM ADTSCNTTTI TNVVATVDVP PRNILELDLN LPAPEDDLRE 300 AKFQFPATQK SMVLAGAPPL VGCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	2e-41	C2H2 family protein