PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346992.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 302aa    MW: 32425.5 Da    PI: 4.4846
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346992.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.22.9e-05277299223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+ksF++ s L++H +  H
  XP_027346992.1 277 SCKSCKKSFTSESGLQQHNKAkH 299
                     7*****************88766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEVPMEFWGV EVKVGQSVKI DPAEPSSGYI HVSQVALGEA KKDKASEPVV LYLKVDDQKF  60
VLGTLSRDDI PQLSLDLVLD SESEFSHNSK SASVYFCGYK VLTDDGNVSD FSDSDDDLAL  120
KGQDNGKPEI KAEVAKVAKT PKPVPMVGAS AEQVKIVDPK KDEKDESDDD SDDESADEDD  180
SGSSDEMDAD SDSDEDSESD EDDEETPVKK VELGKKRANE SASKTPVPNK KAKNATPEKT  240
DGKKFVHTAT PHPMKKGGKT LNSGAKGQSP NSGGQLSCKS CKKSFTSESG LQQHNKAKHG  300
GQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.13e-21C2H2 family protein