PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346827.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 707aa    MW: 77696.3 Da    PI: 6.9981
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3789.8e-25129230199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae++      +++ + s++l+ +d++g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   + ++
  XP_027346827.1 129 FCKTLTASDTSTHGGFSVPRRAAEDCfppldySLQRP-SQELVAKDLHGQEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGDD 220
                     99****************************9966654.569************************************************..3489 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+++++r+
  XP_027346827.1 221 GELRLGIRRA 230
                     999****996 PP
2Auxin_resp117.31.3e-38255336182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                     +++a+st+++F+v YnPr+ +seF+++v+k++k+l+ ++svGmRf+m+feted++err++G++vg++d++pvrWp+SkWr+L
  XP_027346827.1 255 VVNALSTRCAFSVHYNPRVNSSEFIIPVQKFLKSLDYSYSVGMRFRMRFETEDAAERRFTGLIVGINDVNPVRWPGSKWRCL 336
                     6899*****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 707 aa     Download sequence    
MAGLIDLNNT TEDDETPSFG SSSVCLELWH ACAGPMISLP KKGSVVVYFP QGHLEHLHDF  60
PLPASLNIPS HVFCRVVHVN LHAEEGSDEV YCQVLLVPES EQKLRGGEID ADGEEEDNEA  120
VMKSTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SLQRPSQELV AKDLHGQEWR  180
FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GELRLGIRRA AQLKSGSAFS  240
TLSSQQLNPS CLMEVVNALS TRCAFSVHYN PRVNSSEFII PVQKFLKSLD YSYSVGMRFR  300
MRFETEDAAE RRFTGLIVGI NDVNPVRWPG SKWRCLLVRW DDLETTRHNR VSPWEIEPYG  360
SASTANNLIA AGLKRTKIGL PSAKLEFPVP NGIGTSDFGE SLRFQKVLQG QEMLGVNTTF  420
DSISAQSHQL SELRRCYPGS NCPGIAATTG NSIRIPQVSS DLSCNGIGFS ESFRFQKVLQ  480
GQEILPSQPY ARALSVDEAC GNGRFGLFDG YQALRSKNGW SSNMNNNSSL LHPPVPSRQV  540
SSPSSVLMFQ QAVNPVSTSD YNNKINQVMK DKVHQRGSYA SEVEGGTFVS TPAYEPILCG  600
LAHEGTNSFA ISKLHNQLDS SCSHDSISVL RGSQELVSSC KSSCRVFGFS LTEGAPVANK  660
EADASPVACQ LNSGASFTRH VEDDFHPGHS LRNKAVGSYC TKGVLQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.10.0ARF family protein