PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027346644.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB_related | ||||||||
Protein Properties | Length: 229aa MW: 25440.4 Da PI: 9.5423 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.2 | 1.9e-13 | 71 | 115 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + + G+g+W+ I+r + k+Rt+ q+ s+ qky XP_027346644.1 71 PWTEEEHRLFLLGLQNVGKGDWRGISRNFVKTRTPTQVASHAQKY 115 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MCSAEKDQGI MLFGVLLTVP DNNNNSFRKS ASMNNLSQYE PSPPHDPNAG YASDDVVHPS 60 RHTRERKRGV PWTEEEHRLF LLGLQNVGKG DWRGISRNFV KTRTPTQVAS HAQKYFLRRH 120 SHNRRRRRSS LFDITTDSVM EEEQEMSSVR PKPFLPVPPS SKMAELDLNE KVSGSALTES 180 LPLSLNLPTS PSSKEHSPRT STHSPSSFQP MSTESLGSGS GGDSIISVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G70000.2 | 8e-55 | MYB_related family protein |