PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346594.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 298aa    MW: 33112.5 Da    PI: 8.2875
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346594.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.65.2e-19153207256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq   Lee F+++++++ ++++ LAk+l+L  rqV vWFqNrRa+ k
  XP_027346594.1 153 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 207
                     788899***********************************************98 PP
2HD-ZIP_I/II125.13.2e-40153242191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rl+keq++lLEesF+++++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eLr +l
  XP_027346594.1 153 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELR-AL 242
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MGLDQDASNS GLHLILGLAL TSTPQEDTIT PSPSNNVHDH HQLTLMPKPS PTKSFSSKSN  60
FIQPEPSLTL GLSGESYPPQ VVKVPKNIGH NIVSCEDPLD LSTQTSPRSA VSSFSSGRIK  120
RERDVSYEEV EPTETERVSS RASDEEEDGT TARKKLRLTK EQSALLEESF KQHSTLNPKQ  180
KQALAKQLNL RPRQVEVWFQ NRRARTKLKQ TEVDCEFLKK CCETLTDENR RLQKELQELR  240
ALKLAQPLYM PMPAATLTMC PSCERLGGVN GGASPKTPFS MAPKPHFYNP FANPSAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202210RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.11e-102HD-ZIP family protein