PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346302.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 502aa MW: 55789.5 Da PI: 6.6455

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8.3e-07	256	277	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_027346302.1 256 FCTICGKGFKRDANLRMHMRGH 277 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MDSNGSICAN TWTRSSSLTS PANGLSSDPL SFPDYGISAE APYKNFNQLS QTQSQLPCNS 60 NNETKIPGQE NFPLSESSQI GKLQDWDPSV MLNNLSFLEE KIHQLQGLVH LIVNQKGIGQ 120 PNELVTQEQQ LITTDLTSII VQLISTAGSL LPSVRHTLIN TSPLVGQLGQ LRGTIVPSRL 180 GPSSSCIQPQ NNSEKKISDQ SMQSDLPNNC EMEQNYNIED HELKDEDADD GENLPPGSYE 240 ILQLEKEEIL APHTHFCTIC GKGFKRDANL RMHMRGHGDE YKTPAALAKP HKESGSQPKL 300 IKRYSCPYPG CKRNKDHKKF QPLKTILCVK NHYKRTHCDK SYTCSRCNTK KFSVMADLKT 360 HEKHCGKDKW LCSCGTTFSR KDKLFGHIAL FQGHTPAIPL DDTKGIAEPP NHDGKENNTK 420 VGSINFSFGS NNPNGDRVQN VMNLKGNIDD PINYFPTLNF EANFGGFNEF TRPLFDDSEG 480 SFSFMMPGSF KSEGESTSDN LL

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MDSNGSICAN TWTRSSSLTS PANGLSSDPL SFPDYGISAE APYKNFNQLS QTQSQLPCNS  60
NNETKIPGQE NFPLSESSQI GKLQDWDPSV MLNNLSFLEE KIHQLQGLVH LIVNQKGIGQ  120
PNELVTQEQQ LITTDLTSII VQLISTAGSL LPSVRHTLIN TSPLVGQLGQ LRGTIVPSRL  180
GPSSSCIQPQ NNSEKKISDQ SMQSDLPNNC EMEQNYNIED HELKDEDADD GENLPPGSYE  240
ILQLEKEEIL APHTHFCTIC GKGFKRDANL RMHMRGHGDE YKTPAALAKP HKESGSQPKL  300
IKRYSCPYPG CKRNKDHKKF QPLKTILCVK NHYKRTHCDK SYTCSRCNTK KFSVMADLKT  360
HEKHCGKDKW LCSCGTTFSR KDKLFGHIAL FQGHTPAIPL DDTKGIAEPP NHDGKENNTK  420
VGSINFSFGS NNPNGDRVQN VMNLKGNIDD PINYFPTLNF EANFGGFNEF TRPLFDDSEG  480
SFSFMMPGSF KSEGESTSDN LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-169	C2H2 family protein