PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346301.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 519aa MW: 57722.6 Da PI: 6.6843

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21	8.7e-07	273	294	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_027346301.1 273 FCTICGKGFKRDANLRMHMRGH 294 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MDSNGSICAN TWTRSSSLTS PANGLSSDPL SFPGIGLQHN QRKWDDPSIS DYGISAEAPY 60 KNFNQLSQTQ SQLPCNSNNE TKIPGQENFP LSESSQIGKL QDWDPSVMLN NLSFLEEKIH 120 QLQGLVHLIV NQKGIGQPNE LVTQEQQLIT TDLTSIIVQL ISTAGSLLPS VRHTLINTSP 180 LVGQLGQLRG TIVPSRLGPS SSCIQPQNNS EKKISDQSMQ SDLPNNCEME QNYNIEDHEL 240 KDEDADDGEN LPPGSYEILQ LEKEEILAPH THFCTICGKG FKRDANLRMH MRGHGDEYKT 300 PAALAKPHKE SGSQPKLIKR YSCPYPGCKR NKDHKKFQPL KTILCVKNHY KRTHCDKSYT 360 CSRCNTKKFS VMADLKTHEK HCGKDKWLCS CGTTFSRKDK LFGHIALFQG HTPAIPLDDT 420 KGIAEPPNHD GKENNTKVGS INFSFGSNNP NGDRVQNVMN LKGNIDDPIN YFPTLNFEAN 480 FGGFNEFTRP LFDDSEGSFS FMMPGSFKSE GESTSDNLL

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MDSNGSICAN TWTRSSSLTS PANGLSSDPL SFPGIGLQHN QRKWDDPSIS DYGISAEAPY  60
KNFNQLSQTQ SQLPCNSNNE TKIPGQENFP LSESSQIGKL QDWDPSVMLN NLSFLEEKIH  120
QLQGLVHLIV NQKGIGQPNE LVTQEQQLIT TDLTSIIVQL ISTAGSLLPS VRHTLINTSP  180
LVGQLGQLRG TIVPSRLGPS SSCIQPQNNS EKKISDQSMQ SDLPNNCEME QNYNIEDHEL  240
KDEDADDGEN LPPGSYEILQ LEKEEILAPH THFCTICGKG FKRDANLRMH MRGHGDEYKT  300
PAALAKPHKE SGSQPKLIKR YSCPYPGCKR NKDHKKFQPL KTILCVKNHY KRTHCDKSYT  360
CSRCNTKKFS VMADLKTHEK HCGKDKWLCS CGTTFSRKDK LFGHIALFQG HTPAIPLDDT  420
KGIAEPPNHD GKENNTKVGS INFSFGSNNP NGDRVQNVMN LKGNIDDPIN YFPTLNFEAN  480
FGGFNEFTRP LFDDSEGSFS FMMPGSFKSE GESTSDNLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-173	C2H2 family protein