PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027346279.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | Whirly | ||||||||
Protein Properties | Length: 268aa MW: 29754.7 Da PI: 9.5989 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 201.3 | 1.3e-62 | 91 | 229 | 1 | 139 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 s+yk+kaal++ ++ p+f ldsg++k++r+G +ll++a+a+++r+ydW++kq+f+ls+ e++++++l+++esceffhdp +++s+eGkvrk+lk XP_027346279.1 91 SIYKGKAALTLTPRPPEFAPLDSGAFKISREGYVLLQFAPAVGQRQYDWNRKQVFSLSVGEMGSVISLGTRESCEFFHDPLKGKSDEGKVRKVLK 185 7********************************************************************************************** PP Whirly 96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 +eP+pdGsG+f+n+sv+n+lv+++e++s+Pv+kae avl s ++ XP_027346279.1 186 LEPFPDGSGHFFNFSVQNKLVNVDENMSIPVTKAELAVLSSTFN 229 ***************************************99885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MLNLQLQLHS PPSPLSSSSS LSSSSSYASL KLFPNHSFSP NTLPFNTPKP FTLRCRHSDL 60 FAQNTLASTP RPARPTPSVG ALPPRVYVGY SIYKGKAALT LTPRPPEFAP LDSGAFKISR 120 EGYVLLQFAP AVGQRQYDWN RKQVFSLSVG EMGSVISLGT RESCEFFHDP LKGKSDEGKV 180 RKVLKLEPFP DGSGHFFNFS VQNKLVNVDE NMSIPVTKAE LAVLSSTFNF IMPYLLGWHT 240 FANSIKPDDY NGENNANPRY GGDYEWNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14410.1 | 1e-111 | Whirly family protein |