PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346192.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB_related
Protein Properties Length: 316aa    MW: 35303.8 Da    PI: 7.1445
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding271.1e-08255308146
                      TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT....TTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg....tWktIartmg....kgRtlkqcksrwqk 46 
                      r+rWT eE++ l+++v ++ ++     W++I +       k+Rt+ ++k++w +
   XP_027346192.1 255 RLRWTDEEEKVLKEGVLKFSMEnqniPWRKILEFGChvfhKTRTPADLKDKWKN 308
                      89******************************9888****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MRVKSLCKRR SVPSASGPSF SAIPLLSDQR IATVYDTEND DDDCIKSEAE AEPEPRPEPV  60
DLLDRSICIC CDDRGKEEEV LVCSEKDCPV AVHASCIGSE PKFDASGNFY CPYCWYKRAV  120
DTCQQLREKA MVAKKALSTF LETRADSNAT RGRENVNPVQ DGPYVSETES EEDEGEVSVT  180
STGSSVSETG DSESEGISVK KRKVGSVRKS LLPSSRGKLA RDVNAEVQDS KSLRKPLRSP  240
LQGMKQASLT AKRRRLRWTD EEEKVLKEGV LKFSMENQNI PWRKILEFGC HVFHKTRTPA  300
DLKDKWKNIT SKEGCK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1252256KRRRL