PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346119.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 257aa    MW: 29636.9 Da    PI: 4.9339
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346119.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.26.9e-1957109456
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++++ +q+++Le+ Fe ++++  e++++LA++lgL+ rqV +WFqNrRa++k
  XP_027346119.1  57 KRRLSFDQVKALERSFEVDNKLEPERKTKLAEELGLQPRQVAIWFQNRRARWK 109
                     4578889*********************************************9 PP
2HD-ZIP_I/II129.11.7e-4155147193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrls +qvk+LE+sFe ++kLeperK++la+eLglqprqva+WFqnrRAR+ktkqlE+dy +Lk++yd lk e ++Le+e+e+L+ +l+e
  XP_027346119.1  55 EKKRRLSFDQVKALERSFEVDNKLEPERKTKLAEELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNYDVLKVEYHNLEQENEALTIKLRE 147
                     69*************************************************************************************988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MKRLNNSHTM ATSLSICPSG VNQRKETQGY SDEFQAMLDR LDQEDSYEDG SSVLEKKRRL  60
SFDQVKALER SFEVDNKLEP ERKTKLAEEL GLQPRQVAIW FQNRRARWKT KQLERDYGVL  120
KSNYDVLKVE YHNLEQENEA LTIKLRELKE KLSRGGAESN ELVKEESPIS EVRDRGASES  180
NSNGVVKEEI NDDSLLCVNG SLPSSSSLMN WLHYSDSDSR GSPDKTFQTH FMRMEEPSFF  240
SINEFCNFFS VDQSPTL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15685KKRRLSFDQVKALERSFEVDNKLEPERKTK
2104112RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65310.21e-49HD-ZIP family protein