PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027346041.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | AP2 | ||||||||
Protein Properties | Length: 473aa MW: 51732.2 Da PI: 8.8443 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.9e-17 | 152 | 201 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_027346041.1 152 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 201 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence |
MLDLNLNAES TDSTQNGGSP FLLKNFPEGS WNQMAESGTS NSSVVNADGS SNGGGDEDSC 60 STRADDVFTF NFNILKVEGG NDVVTKELFP VSGGVKGRDE GGSGNWQGKA TTSFPTRNGL 120 ADLSFDREVK MVQPQPQQPA KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG 180 GFDTAHAAAR AYDRAAIKFR GVDADINFNL SDYEDDLKQM KNLSKEEFVH ILRRQSTGFS 240 RGSSKYRGVT LHKCGRWEAR MGQFLGKKAY DKAAIKCNGR EAVTNFEPST YEGEMKSAVI 300 NEGGSQNLDL NLGIATPGPV PKENWGQPQF PSVPYNMHGG RYSRMETNVN SGIGNPFLKR 360 LVVTEERPSV WNGMYPSFFP NEERAERIGI DPSKGLPNWA WQTHGQVTAS PLSPFSAAAS 420 SGFSNSATFP STTMFPTGSM NSIGQSLCFT SSSSPSSNAS QNYYHVKPPQ GPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.1 | 1e-110 | AP2 family protein |