PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346039.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 488aa MW: 53460.1 Da PI: 8.4217

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.5	6.1e-17	152	201	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_027346039.1 152 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 201 78*****************......55**********************997 PP
2	AP2	41.2	4.2e-13	244	294	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_027346039.1 244 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 294 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MLDLNLNAES TDSTQNGGSP FLLKNFPEGS WNQMAESGTS NSSVVNADGS SNGGGDEDSC 60 STRADDVFTF NFNILKVEGG NDVVTKELFP VSGGVKGRDE GGSGNWQGKA TTSFPTRNGL 120 ADLSFDREVK MVQPQPQQPA KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG 180 GFDTAHAAAR AYDRAAIKFR GVDADINFNL SDYEDDLKQM KNLSKEEFVH ILRRQSTGFS 240 RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI KCNGREAVTN 300 FEPSTYEGEM KSAVINEGGS QNLDLNLGIA TPGPVPKENW GQPQFPSVPY NMHGGRYSRM 360 ETNVNSGIGN PFLKRLVVTE ERPSVWNGMY PSFFPNEERA ERIGIDPSKG LPNWAWQTHG 420 QVTASPLSPF SAAASSGFSN SATFPSTTMF PTGSMNSIGQ SLCFTSSSSP SSNASQNYYH 480 VKPPQGPP

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MLDLNLNAES TDSTQNGGSP FLLKNFPEGS WNQMAESGTS NSSVVNADGS SNGGGDEDSC  60
STRADDVFTF NFNILKVEGG NDVVTKELFP VSGGVKGRDE GGSGNWQGKA TTSFPTRNGL  120
ADLSFDREVK MVQPQPQQPA KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG  180
GFDTAHAAAR AYDRAAIKFR GVDADINFNL SDYEDDLKQM KNLSKEEFVH ILRRQSTGFS  240
RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI KCNGREAVTN  300
FEPSTYEGEM KSAVINEGGS QNLDLNLGIA TPGPVPKENW GQPQFPSVPY NMHGGRYSRM  360
ETNVNSGIGN PFLKRLVVTE ERPSVWNGMY PSFFPNEERA ERIGIDPSKG LPNWAWQTHG  420
QVTASPLSPF SAAASSGFSN SATFPSTTMF PTGSMNSIGQ SLCFTSSSSP SSNASQNYYH  480
VKPPQGPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-121	AP2 family protein