PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027345915.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 400aa MW: 44592.3 Da PI: 5.7106

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027345915.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.4	2.5e-13	241	286	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+ +P+ K++Ka+ L Av YI++L XP_027345915.1 241 NHVEAERQRREKLNQRFYALRSAVPNV-----SKMDKASLLSDAVSYINEL 286 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MKGQTREFFR FASSSQVEAS NALQQRLQFV LQNRPEWWVY AIYWRASKDG NSSLALEWGD 60 GYFRGENGKE DKETITLEDT EMNDVEWFYT VSQTRSFGAS EGVVGCAFSS GVDVWLSGVN 120 EFRLNECDNR VREALSNGIQ TLVCVSTPNG VVELGSCYEF TLDFGFLQMV KSVFEMSKSI 180 GVGSKEKDKQ RGDEEAPATA KASTGVGVEG SSPDSSGPSD ADVAMMMRRE GRKARDQLPL 240 NHVEAERQRR EKLNQRFYAL RSAVPNVSKM DKASLLSDAV SYINELKAKI NHLEATLEGR 300 SNHEVAEPVQ TMQASVSASP TAPMRVDVKI LGSEAMVRVQ SLNVNHPSAR LMDALRDLHL 360 QILHATMSNI KEMMLQDVVV RVPHHLMTEE ALKTAILQRL

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MKGQTREFFR FASSSQVEAS NALQQRLQFV LQNRPEWWVY AIYWRASKDG NSSLALEWGD  60
GYFRGENGKE DKETITLEDT EMNDVEWFYT VSQTRSFGAS EGVVGCAFSS GVDVWLSGVN  120
EFRLNECDNR VREALSNGIQ TLVCVSTPNG VVELGSCYEF TLDFGFLQMV KSVFEMSKSI  180
GVGSKEKDKQ RGDEEAPATA KASTGVGVEG SSPDSSGPSD ADVAMMMRRE GRKARDQLPL  240
NHVEAERQRR EKLNQRFYAL RSAVPNVSKM DKASLLSDAV SYINELKAKI NHLEATLEGR  300
SNHEVAEPVQ TMQASVSASP TAPMRVDVKI LGSEAMVRVQ SLNVNHPSAR LMDALRDLHL  360
QILHATMSNI KEMMLQDVVV RVPHHLMTEE ALKTAILQRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	9e-63	bHLH family protein