PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027345548.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family AP2
Protein Properties Length: 513aa    MW: 56912.5 Da    PI: 6.7958
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027345548.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.6e-17160209155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_027345548.1 160 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 209
                     78*******************......55************************997 PP
2AP243.86.5e-14252302155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV+ +k  grW+A+   +     +k+++lg f+t+ eAa+a+++a+ k +g
  XP_027345548.1 252 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 302
                     89********.7******5553..2.26**********99**********99776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MWDLNDSPDQ RKDEESEGCS SLKTSIDGDD DNNKGKRVGS VSNSSSSAVV IEDGSEEDDD  60
EEEEGTRRSM KKRSSKIFGF SVTQDEEEYM DSEHPPVTRQ FFPVEEPDVA VASGGGSSTF  120
PRAHWVGVKF CQSETLGAGK SVEVSQPMKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD  180
CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFSIED YEDDLKQMSN LTKEEFVHVL  240
RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEIEAA RAYDKAAIKC  300
NGKEAVTNFD PSIYDNELNS ESTGTTADHN LDLSLGNSSS KTCNNQASGN HTTNAATHDQ  360
HLQSESNWRN GGSKPKLVNI LPKPCNRSNK DAHGRDVHGE SEALRMLSQT HLHSPASNEM  420
QRYGPYRSPG GESQMLQNFA LIHPPNFHFP SSSIGGRIGS DLSLSMADQQ QWQSGPPHYL  480
ATAAASSGFP PQIRPSSQGW LQKNGFHTLM RPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-128AP2 family protein