PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027345443.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 604aa MW: 65909.5 Da PI: 5.231

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027345443.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.3	1.2e-12	427	472	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_027345443.1 427 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 472 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MTEYRSPPTM NLWTDDNSSV MEAFMSSSDL SSLAPPPPPT PTQSQPLFNQ ETLQQRLHAL 60 IEGARESWTY AIFWQSSYDY SGASLLGWGD GYYKGEEDKG KGKATKTTSS AEQDHRKKVL 120 RELNSLISGP SASGDDAVDE EVTDTEWFFL VSMTQSFVNG SGLPGQAFFN SSPVWVTGAD 180 RLSGSACERA RQGQVFGLQT LVCIPSANGV VELASTEVIF QNADLMNKVR VLFNFNNLDA 240 GSWPLNSVTT DQGENDPSSL WLSDPSGIEI RDSAANTVAP DSANTGTVSK TLQFETPGSS 300 TLTEAPSAVH VPNSHQQQSG EILSFGESKK NSYNGNFFPS VVAEENKKRR SPVSRSSIDD 360 GMLSFTSGVI LPSSNLKSGG GGGGDSDHSD LEASVVKEAD SSRVVEPEKR PRKRGRKPAN 420 GREEPLNHVE AERQRREKLN QRFYALRAVV PNVSKMDKAS LLGDAISYIN ELKSKLHGLE 480 SEKGELEKQL DSTKKELELA SKHPPPPPPS DIEAKKMTTK LVDLDIDVKI IGWDAMIRIQ 540 CSKKNHPAAR LMAALKDLDL EVHHASVSVV NDLMIQQATV NMGNRFYTQE QLLLALSSKV 600 GDAR

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MTEYRSPPTM NLWTDDNSSV MEAFMSSSDL SSLAPPPPPT PTQSQPLFNQ ETLQQRLHAL  60
IEGARESWTY AIFWQSSYDY SGASLLGWGD GYYKGEEDKG KGKATKTTSS AEQDHRKKVL  120
RELNSLISGP SASGDDAVDE EVTDTEWFFL VSMTQSFVNG SGLPGQAFFN SSPVWVTGAD  180
RLSGSACERA RQGQVFGLQT LVCIPSANGV VELASTEVIF QNADLMNKVR VLFNFNNLDA  240
GSWPLNSVTT DQGENDPSSL WLSDPSGIEI RDSAANTVAP DSANTGTVSK TLQFETPGSS  300
TLTEAPSAVH VPNSHQQQSG EILSFGESKK NSYNGNFFPS VVAEENKKRR SPVSRSSIDD  360
GMLSFTSGVI LPSSNLKSGG GGGGDSDHSD LEASVVKEAD SSRVVEPEKR PRKRGRKPAN  420
GREEPLNHVE AERQRREKLN QRFYALRAVV PNVSKMDKAS LLGDAISYIN ELKSKLHGLE  480
SEKGELEKQL DSTKKELELA SKHPPPPPPS DIEAKKMTTK LVDLDIDVKI IGWDAMIRIQ  540
CSKKNHPAAR LMAALKDLDL EVHHASVSVV NDLMIQQATV NMGNRFYTQE QLLLALSSKV  600
GDAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	409	417	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	0.0	bHLH family protein