PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027345441.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 646aa MW: 70450.5 Da PI: 5.3429

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027345441.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.3e-12	469	514	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_027345441.1 469 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 514 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MTEYRSPPTM NLWTDDNSSV MEAFMSSSDL SSLWLPTPQS AASTTTPGPD ASRAPPPPPT 60 PTQSQPLFNQ ETLQQRLHAL IEGARESWTY AIFWQSSYDY SGASLLGWGD GYYKGEEDKG 120 KGKATKTTSS AEQDHRKKVL RELNSLISGP SASGDDAVDE EVTDTEWFFL VSMTQSFVNG 180 SGLPGQAFFN SSPVWVTGAD RLSGSACERA RQGQVFGLQT LVCIPSANGV VELASTEVIF 240 QNADLMNKVR VLFNFNNLDA GSWPLNSVTT DQGENDPSSL WLSDPSGIEI RDSAANTVAP 300 DSANTGTVSK TLQFETPGSS TLTEAPSAVH VPNSHQQRQQ SQSQGLFPRE LNFSSSLKPE 360 SGEILSFGES KKNSYNGNFF PSVVAEENKK RRSPVSRSSI DDGMLSFTSG VILPSSNLKS 420 GGGGGGDSDH SDLEASVVKE ADSSRVVEPE KRPRKRGRKP ANGREEPLNH VEAERQRREK 480 LNQRFYALRA VVPNVSKMDK ASLLGDAISY INELKSKLHG LESEKGELEK QLDSTKKELE 540 LASKHPPPPP PSDIEAKKMT TKLVDLDIDV KIIGWDAMIR IQCSKKNHPA ARLMAALKDL 600 DLEVHHASVS VVNDLMIQQA TVNMGNRFYT QEQLLLALSS KVGDAR

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MTEYRSPPTM NLWTDDNSSV MEAFMSSSDL SSLWLPTPQS AASTTTPGPD ASRAPPPPPT  60
PTQSQPLFNQ ETLQQRLHAL IEGARESWTY AIFWQSSYDY SGASLLGWGD GYYKGEEDKG  120
KGKATKTTSS AEQDHRKKVL RELNSLISGP SASGDDAVDE EVTDTEWFFL VSMTQSFVNG  180
SGLPGQAFFN SSPVWVTGAD RLSGSACERA RQGQVFGLQT LVCIPSANGV VELASTEVIF  240
QNADLMNKVR VLFNFNNLDA GSWPLNSVTT DQGENDPSSL WLSDPSGIEI RDSAANTVAP  300
DSANTGTVSK TLQFETPGSS TLTEAPSAVH VPNSHQQRQQ SQSQGLFPRE LNFSSSLKPE  360
SGEILSFGES KKNSYNGNFF PSVVAEENKK RRSPVSRSSI DDGMLSFTSG VILPSSNLKS  420
GGGGGGDSDH SDLEASVVKE ADSSRVVEPE KRPRKRGRKP ANGREEPLNH VEAERQRREK  480
LNQRFYALRA VVPNVSKMDK ASLLGDAISY INELKSKLHG LESEKGELEK QLDSTKKELE  540
LASKHPPPPP PSDIEAKKMT TKLVDLDIDV KIIGWDAMIR IQCSKKNHPA ARLMAALKDL  600
DLEVHHASVS VVNDLMIQQA TVNMGNRFYT QEQLLLALSS KVGDAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	451	459	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein