PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027344858.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GATA
Protein Properties Length: 349aa    MW: 37842.8 Da    PI: 6.4515
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027344858.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.57.8e-18242276135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +Cg+ kTp+WR gp g+ktLCnaCG+++++ +l
  XP_027344858.1 242 CLHCGAEKTPQWRTGPMGPKTLCNACGVRFKSGRL 276
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MEAPEYFVGG YFAAGGADQF SPTEKRHADQ KSGEPFVIDD LLDFSNADAI MSDGFFDNVA  60
GNSTDSSTVT AVDSCNSSIS GSDNRFAAAI VPRGFASDHQ FSGELCVPYD DMAELEWLSN  120
LVEDSFSAEE ELKTLQLLSG AAASTAIGAK PQTPESSSST DTLPPFASDD TARNAPFLHT  180
ETPLPGKARS KRSRAAPGDW STRLLHLVTS GEAAEEQKPQ QAKAAPAKRR EGSNAECSGR  240
KCLHCGAEKT PQWRTGPMGP KTLCNACGVR FKSGRLVPEY RPAASPTFVS TKHSNSHRKV  300
LELRRQKELQ RQQHQQLLSQ SSIFGVSNGG DEFLIHHHHH CGHDFRHVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.17e-60GATA family protein