PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027344538.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 833aa    MW: 92004.4 Da    PI: 6.4658
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027344538.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.72e-181573357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_027344538.1 15 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 73
                    5679*****************************************************97 PP
2START176.91.2e-551563642205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+ ++  g+++l 
  XP_027344538.1 156 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPLWFRDCRAVDVLNVLPTAngGTIELL 249
                     7899******************************************************.8888888888****************9999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++vi+++S+ ++q+ p+    +++vRae+lp g+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_027344538.1 250 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVICERSLKNTQNGPSmppVQHFVRAEMLPCGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 344
                     *******************************************9988899********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++kt++a+l+++++
  XP_027344538.1 345 ESSTVLAQKTTMAALRHLRQ 364
                     ***************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 833 aa     Download sequence    
MSCKDGSKNG MDNGKYVRYT PEQVEALERL YHDCPKPSSI RRQQLIRECP ILSNIEPKQI  60
KVWFQNRRCR EKQRKEASRL QAVNRKLTAM NKLLMEENDR LQKQVSQLVY ENGYFRQHTQ  120
NATKDTSCES AVTSGQRSLT TQHPPRDASP AGLLSIAEET LAEFLSKATG TAVEWVQMPG  180
MKPGPDSIGI VAISHGCTGV AARACGLVGL EPTRVAEILK DRPLWFRDCR AVDVLNVLPT  240
ANGGTIELLY MQLYAPTTLA PARDFWLLRY TSVLEDGSLV ICERSLKNTQ NGPSMPPVQH  300
FVRAEMLPCG YLIRPCEGGG SIIHIVDHMD LEPWSVPEVL RPLYESSTVL AQKTTMAALR  360
HLRQISHEVS QSTVTGWGRR PAALRALSQR LSRGFNEALN GFTDEGWSLI GNDGVDDVTI  420
LVNSSPDKLM GLNLSFANGF PSVSNAVLCA KASMLLQNVP PAILLRFLRE HRSEWADNNM  480
DAYTAAAIKV GPCSFSGSRI GNYGGQVILP LAHTIEHEEF LEVIKLEGVA HCPEDTIMPR  540
EVFLLQLCSG MDENAVGTCA ELIFAPIDAS FADDAPLLPS GFRIIPLESG KEASSPNRTL  600
DLASALDIGP TGNRASNDYA GNSSCMRSVM TIAFEFAFES HMQEHVASMA RQYVRSIISS  660
VQRVALALSP SHLSSHAGLR TPLGTPEAQT LAHWICNSYR CYLGVELLKS NNEGNESLLK  720
SLWHLSDAIL CCTLKALPVF TFSNQAGLDM LETTLVALQD ITLEKIFDDH GRKILFSEFP  780
QIIQQGFACL QGGICLSSMG RPVSYERVVA WKVLNEEENA HCICFMFVNW SFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein