PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027344537.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 840aa    MW: 92761.2 Da    PI: 6.5738
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027344537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.72.1e-181573357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_027344537.1 15 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 73
                    5679*****************************************************97 PP
2START176.91.2e-551593672205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+ ++  g+++l 
  XP_027344537.1 159 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPLWFRDCRAVDVLNVLPTAngGTIELL 252
                     7899******************************************************.8888888888****************9999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++vi+++S+ ++q+ p+    +++vRae+lp g+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_027344537.1 253 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVICERSLKNTQNGPSmppVQHFVRAEMLPCGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 347
                     *******************************************9988899********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++kt++a+l+++++
  XP_027344537.1 348 ESSTVLAQKTTMAALRHLRQ 367
                     ***************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 840 aa     Download sequence    
MSCKDGSKNG MDNGKYVRYT PEQVEALERL YHDCPKPSSI RRQQLIRECP ILSNIEPKQI  60
KVWFQNRRCR EKQRKEASRL QAVNRKLTAM NKLLMEENDR LQKQVSQLVY ENGYFRQHTQ  120
NTTQATKDTS CESAVTSGQR SLTTQHPPRD ASPAGLLSIA EETLAEFLSK ATGTAVEWVQ  180
MPGMKPGPDS IGIVAISHGC TGVAARACGL VGLEPTRVAE ILKDRPLWFR DCRAVDVLNV  240
LPTANGGTIE LLYMQLYAPT TLAPARDFWL LRYTSVLEDG SLVICERSLK NTQNGPSMPP  300
VQHFVRAEML PCGYLIRPCE GGGSIIHIVD HMDLEPWSVP EVLRPLYESS TVLAQKTTMA  360
ALRHLRQISH EVSQSTVTGW GRRPAALRAL SQRLSRGFNE ALNGFTDEGW SLIGNDGVDD  420
VTILVNSSPD KLMGLNLSFA NGFPSVSNAV LCAKASMLLQ NVPPAILLRF LREHRSEWAD  480
NNMDAYTAAA IKVGPCSFSG SRIGNYGGQV ILPLAHTIEH EEFLEVIKLE GVAHCPEDTI  540
MPREVFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL ESGKVCSIHS  600
SSPNRTLDLA SALDIGPTGN RASNDYAGNS SCMRSVMTIA FEFAFESHMQ EHVASMARQY  660
VRSIISSVQR VALALSPSHL SSHAGLRTPL GTPEAQTLAH WICNSYRCYL GVELLKSNNE  720
GNESLLKSLW HLSDAILCCT LKALPVFTFS NQAGLDMLET TLVALQDITL EKIFDDHGRK  780
ILFSEFPQII QQGFACLQGG ICLSSMGRPV SYERVVAWKV LNEEENAHCI CFMFVNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein