PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027344481.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 411aa MW: 44994.3 Da PI: 4.666

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027344481.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.4	4.5e-06	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 +C+ +++++ +C+++ +lC +C + H+ H++ XP_027344481.1 4 ICDFCGDQRSMVYCRSDAACLCLSCDRNVHSAnalsrrHSR 44 7*****************************65677777766 PP
2	zf-B_box	18.1	5.8e-06	46	87	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 C++++++++ C + + lC++C H g H++ XP_027344481.1 46 LLCERCNSQPAFVRCAEEKISLCQNCDWLVH-GtsassstHKR 87 57************************99888.44677777776 PP
3	CCT	63.9	4.9e-22	354	397	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RYkeK+ktRkF+Kk+rY+sRKa+A+ R RvKGrFvk+ XP_027344481.1 354 RSNAVMRYKEKKKTRKFDKKVRYASRKARADVRRRVKGRFVKAG 397 899**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MGYICDFCGD QRSMVYCRSD AACLCLSCDR NVHSANALSR RHSRTLLCER CNSQPAFVRC 60 AEEKISLCQN CDWLVHGTSA SSSTHKRQAI NCYSGCPSAV ELSSIWSFVL DIPHMSESTC 120 EQELGLMSIN ENNNKSGWVP PENQDLSDSD QVTDLPALDK SLVCPSSMPE SSLEPRILDQ 180 PAGPANECLP KLCCPATKCP ALCEDENLYD DFNMDEVDLN LENYEELFGV ALSHSEELFE 240 NGGIDSLFGT KDMSAGDSNC QDAVAAEGSS VGLVNTMQPA CSNAASADSI LSTKTEPILC 300 FTGKQAQSNL SFSGITGESS AGDYQDCGAS SMLLMGEPPW LTPCPENSLQ SANRSNAVMR 360 YKEKKKTRKF DKKVRYASRK ARADVRRRVK GRFVKAGDVY DYDPLSTTRS Y

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MGYICDFCGD QRSMVYCRSD AACLCLSCDR NVHSANALSR RHSRTLLCER CNSQPAFVRC  60
AEEKISLCQN CDWLVHGTSA SSSTHKRQAI NCYSGCPSAV ELSSIWSFVL DIPHMSESTC  120
EQELGLMSIN ENNNKSGWVP PENQDLSDSD QVTDLPALDK SLVCPSSMPE SSLEPRILDQ  180
PAGPANECLP KLCCPATKCP ALCEDENLYD DFNMDEVDLN LENYEELFGV ALSHSEELFE  240
NGGIDSLFGT KDMSAGDSNC QDAVAAEGSS VGLVNTMQPA CSNAASADSI LSTKTEPILC  300
FTGKQAQSNL SFSGITGESS AGDYQDCGAS SMLLMGEPPW LTPCPENSLQ SANRSNAVMR  360
YKEKKKTRKF DKKVRYASRK ARADVRRRVK GRFVKAGDVY DYDPLSTTRS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	1e-131	CO-like family protein