PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027344325.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HB-other

Protein Properties

Length: 364aa MW: 41286.1 Da PI: 5.1523

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027344325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.7	4.6e-19	20	75	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t+ q+ +Le++++ ++yp++e++ LA++l+Lte+qV+ WF+ rR k+k+ XP_027344325.1 20 KKRRLKTPAQVMALEKFYNDHKYPTEEMKSTLADELELTEKQVSGWFCHRRLKDKR 75 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MEELLELQSE EVKLSMEKNK KRRLKTPAQV MALEKFYNDH KYPTEEMKST LADELELTEK 60 QVSGWFCHRR LKDKRLLNDE VGANGRQDRS SGVIQDRGSG LGQDSCGSTK HCDYRFLDPK 120 EVESRDIYNT EFSAVDMTYG QRTHYPEDDS ATDNKSFESS LSLQEWFPQE QDPYDMGPSR 180 FPIPSGPLPP PNPKVAKNMG NKPSGYLKVK GEMEHAAITS VKKQLGKHYR ENGPLLTVEF 240 DTIPLGAFEC HIADPANEPN NVANPIYPNS PDISALKRLS DLSSEEKFKG DRKVKKQNHD 300 SDAVRTLSNE MMVTKRAKVD LLQHYDVQEA PVAEMEPRKS QRYTAEMPYS ISEDETAETG 360 SSID

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MEELLELQSE EVKLSMEKNK KRRLKTPAQV MALEKFYNDH KYPTEEMKST LADELELTEK  60
QVSGWFCHRR LKDKRLLNDE VGANGRQDRS SGVIQDRGSG LGQDSCGSTK HCDYRFLDPK  120
EVESRDIYNT EFSAVDMTYG QRTHYPEDDS ATDNKSFESS LSLQEWFPQE QDPYDMGPSR  180
FPIPSGPLPP PNPKVAKNMG NKPSGYLKVK GEMEHAAITS VKKQLGKHYR ENGPLLTVEF  240
DTIPLGAFEC HIADPANEPN NVANPIYPNS PDISALKRLS DLSSEEKFKG DRKVKKQNHD  300
SDAVRTLSNE MMVTKRAKVD LLQHYDVQEA PVAEMEPRKS QRYTAEMPYS ISEDETAETG  360
SSID

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	25	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-48	HB-other family protein