PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027344310.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HB-other

Protein Properties

Length: 532aa MW: 60670.5 Da PI: 6.3768

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027344310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	7.9e-19	20	75	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t+ q+ +Le++++ ++yp++e++ LA++l+Lte+qV+ WF+ rR k+k+ XP_027344310.1 20 KKRRLKTPAQVMALEKFYNDHKYPTEEMKSTLADELELTEKQVSGWFCHRRLKDKR 75 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MEELLELQSE EVKLSMEKNK KRRLKTPAQV MALEKFYNDH KYPTEEMKST LADELELTEK 60 QVSGWFCHRR LKDKRLLNDE VGANGRQDRS SGVIQDRGSG LGQDSCGSTK HCDYRFLDPK 120 EVESRDIYNT EFSAVDMTYG QRTHYPEDDS ATDNKSFESS LSLQEWFPQE QDPYDMGPSR 180 FPIPSGPLPP PNPKVAKNMG NKPSGYLKVK GEMEHAAITS VKKQLGKHYR ENGPLLTVEF 240 DTIPLGAFEC HIADPANEPN NVANPIYPNS PDISALKRLS DLSSRYDSYF TKLSSQDSHV 300 EGGDFGSLLD SDFQDEKPCQ HINQRSTFHS FTNHLPRRNS SLDLYVDSAG EACAFNSSKN 360 HRMGTKHGLE WIRSDSASNP SDQYEENNLV VKQRDSLLHG YDNSNLKNMK RSEYVKAKPS 420 NLMHKSRIFM NIEKRQPSKR MTKEEKFKGD RKVKKQNHDS DAVRTLSNEM MDPSFTFTPC 480 VTKRAKVDLL QHYDVQEAPV AEMEPRKSQR YTAEMPYSIS EDETAETGSS ID

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MEELLELQSE EVKLSMEKNK KRRLKTPAQV MALEKFYNDH KYPTEEMKST LADELELTEK  60
QVSGWFCHRR LKDKRLLNDE VGANGRQDRS SGVIQDRGSG LGQDSCGSTK HCDYRFLDPK  120
EVESRDIYNT EFSAVDMTYG QRTHYPEDDS ATDNKSFESS LSLQEWFPQE QDPYDMGPSR  180
FPIPSGPLPP PNPKVAKNMG NKPSGYLKVK GEMEHAAITS VKKQLGKHYR ENGPLLTVEF  240
DTIPLGAFEC HIADPANEPN NVANPIYPNS PDISALKRLS DLSSRYDSYF TKLSSQDSHV  300
EGGDFGSLLD SDFQDEKPCQ HINQRSTFHS FTNHLPRRNS SLDLYVDSAG EACAFNSSKN  360
HRMGTKHGLE WIRSDSASNP SDQYEENNLV VKQRDSLLHG YDNSNLKNMK RSEYVKAKPS  420
NLMHKSRIFM NIEKRQPSKR MTKEEKFKGD RKVKKQNHDS DAVRTLSNEM MDPSFTFTPC  480
VTKRAKVDLL QHYDVQEAPV AEMEPRKSQR YTAEMPYSIS EDETAETGSS ID

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	25	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	4e-47	HB-other family protein