PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027344054.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 386aa MW: 42073.8 Da PI: 8.2832

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027344054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131	4e-41	91	167	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCe+hsk+++v++ g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ XP_027344054.1 91 CLVDGCHSDLSNCRDYHRRHKVCEIHSKTAQVTIGGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQP 167 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MDWNLKAPSW DLTEVDQANV PNMEIMDGSS RYGVYRSKGE FSVDLKLGQV GISGTETKSK 60 DAGGVSKVAP SSSGSSKRAR AINNGTQTVS CLVDGCHSDL SNCRDYHRRH KVCEIHSKTA 120 QVTIGGQKQR FCQQCSRFHS LEEFDEGKRS CRKRLDGHNR RRRKPQPEPL TRSGSFLSNY 180 QGTQLLPFTS SHVYPSTTVV NPAWGGVVTS GGDVRLQNQQ NQQVHLVDKQ DLFLGSSPTG 240 YKEGKQVAFM QGDHTLNNQS PHLPTAPVGQ AQTFLRTSPF SESSGLRCKM FCDSLTSSVH 300 DSSSCALSLL SSPPTHNPGN GLNQMMNAHS PLMHQPLGLS LHDNSLGPVD PVMGPNGSDH 360 SSSMYNLGSN GSQGNEAPPL FPFQWE

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MDWNLKAPSW DLTEVDQANV PNMEIMDGSS RYGVYRSKGE FSVDLKLGQV GISGTETKSK  60
DAGGVSKVAP SSSGSSKRAR AINNGTQTVS CLVDGCHSDL SNCRDYHRRH KVCEIHSKTA  120
QVTIGGQKQR FCQQCSRFHS LEEFDEGKRS CRKRLDGHNR RRRKPQPEPL TRSGSFLSNY  180
QGTQLLPFTS SHVYPSTTVV NPAWGGVVTS GGDVRLQNQQ NQQVHLVDKQ DLFLGSSPTG  240
YKEGKQVAFM QGDHTLNNQS PHLPTAPVGQ AQTFLRTSPF SESSGLRCKM FCDSLTSSVH  300
DSSSCALSLL SSPPTHNPGN GLNQMMNAHS PLMHQPLGLS LHDNSLGPVD PVMGPNGSDH  360
SSSMYNLGSN GSQGNEAPPL FPFQWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	165	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	3e-68	SBP family protein