PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343978.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family SBP
Protein Properties Length: 189aa    MW: 21405.8 Da    PI: 8.5719
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP134.53.5e-4268144278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cq+e+C adl+ ak+yhrrhkvCe hskapvv+v+gl+qrfCqqCsrfhel efDe+krsCrrrLa+hnerrrk++a
  XP_027343978.1  68 CQAEECGADLTAAKRYHRRHKVCELHSKAPVVMVAGLRQRFCQQCSRFHELVEFDEAKRSCRRRLARHNERRRKSNA 144
                     **************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEGRSIERKQ ISMENVRKES TIEVVEDEEE EEDESGGGGV VEYEKKKGCG GSGRRGSSGS  60
GGVSSPSCQA EECGADLTAA KRYHRRHKVC ELHSKAPVVM VAGLRQRFCQ QCSRFHELVE  120
FDEAKRSCRR RLARHNERRR KSNAETCNEG CNSNKGQHPN ESHCRNVDDW KKIQMNMGRS  180
TGYKSFHIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47070.13e-27SBP family protein