PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343901.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HB-other

Protein Properties

Length: 740aa MW: 82164.5 Da PI: 7.2698

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.9	1.7e-18	16	74	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+l++ +++ps +r++L +++ +++ +q+kvWFqNrR +ek+ XP_027343901.1 16 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 74 5679*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MAMSCKDGKQ GLDNGKYVRY TPEQVEALER LYHDCPKPSS IRRQQLIREC PILSNIEPKQ 60 IKVWFQNRRC REKQRKEASR LQAVNRKLTA MNKLLMEEND RLQKQVSQLV YENGYFRQHT 120 QNTTLATKDT SCESAVTSGQ RSLTTQHPPR DASPAGLVGK SLLGLLLTML SVKTWLFMFG 180 LMKSCVIFPR LMSIAEETLA EFLSKATGTA VEWVQMPGMK VAEILKDRPS WFRDCRAVDV 240 LNVLPTANGG TIELLYMQPW SVPEVLRPLY ESSTVLAQKT TMVALRQLRQ ISHEVSQSNV 300 TGWGRRPAAL RALCQKLSRL IYSTGALFLL NFMESKFGIS YPFPGRGFNE AINGFTDEGW 360 SVMGNDGVDD VTVLVNSSPD KLMGLNLSFA NGFPSVSNTV LCAKASMLLQ NVPPAILLRF 420 LREHRSEWAD NNMDAYSAAA IKVGPCSLSG SRVGNFGGQV IHPLAHTIEH EEFLEVIKLE 480 GIANSPEETI MPREMFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL 540 DSGKEASNPN RTLDLASALD IGPAGNRTSN DYSGNSGCMR SVMTIAFEFA FESHMQEHVA 600 TMARQYVRSI ISSVQRVALA LSPSHLSSQA GLRTPLGTPE AQTLARWICN SYRCYLGVEL 660 LKSNNEGNES LLKSLWHHSD AILCCTLKAL PVFTFANQAG LDMLETTLVA LQDITLEKIF 720 DDHGRKILCS EFPQIIQQVY

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MAMSCKDGKQ GLDNGKYVRY TPEQVEALER LYHDCPKPSS IRRQQLIREC PILSNIEPKQ  60
IKVWFQNRRC REKQRKEASR LQAVNRKLTA MNKLLMEEND RLQKQVSQLV YENGYFRQHT  120
QNTTLATKDT SCESAVTSGQ RSLTTQHPPR DASPAGLVGK SLLGLLLTML SVKTWLFMFG  180
LMKSCVIFPR LMSIAEETLA EFLSKATGTA VEWVQMPGMK VAEILKDRPS WFRDCRAVDV  240
LNVLPTANGG TIELLYMQPW SVPEVLRPLY ESSTVLAQKT TMVALRQLRQ ISHEVSQSNV  300
TGWGRRPAAL RALCQKLSRL IYSTGALFLL NFMESKFGIS YPFPGRGFNE AINGFTDEGW  360
SVMGNDGVDD VTVLVNSSPD KLMGLNLSFA NGFPSVSNTV LCAKASMLLQ NVPPAILLRF  420
LREHRSEWAD NNMDAYSAAA IKVGPCSLSG SRVGNFGGQV IHPLAHTIEH EEFLEVIKLE  480
GIANSPEETI MPREMFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL  540
DSGKEASNPN RTLDLASALD IGPAGNRTSN DYSGNSGCMR SVMTIAFEFA FESHMQEHVA  600
TMARQYVRSI ISSVQRVALA LSPSHLSSQA GLRTPLGTPE AQTLARWICN SYRCYLGVEL  660
LKSNNEGNES LLKSLWHHSD AILCCTLKAL PVFTFANQAG LDMLETTLVA LQDITLEKIF  720
DDHGRKILCS EFPQIIQQVY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52150.3	0.0	HD-ZIP family protein