PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343461.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 426aa MW: 47838.9 Da PI: 6.5241

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.1	4.7e-06	67	93	4	30
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 h + ErrRR+++ ++f L ++P + XP_027343461.1 67 DHIMSERRRRQQMAERFIALSAIIPGL 93 6999*********************86 PP
2	HLH	41	3.4e-13	242	287	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L +P + kK +K++iL++A++Y+k+Lq XP_027343461.1 242 HIMAERKRRQELTERFIALSATIPAL-----KKTDKSSILREAINYVKQLQ 287 999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MAITPFSINA KQIVLLTVKR VVGIEQQALY SQTHDSMNSS SSLGNINFEL TTTQGTKRVR 60 TSSETQDHIM SERRRRQQMA ERFIALSAII PGLKKELDDE KDPLELEECH TEDEEFLRDI 120 LQQPAVSSES ESQPFVQLTA AAVTDGGSSL SSDEMVGSER PGKRTRLSSS PQPRAYILSF 180 DNSTIIPATP QPQPQPHARS SKSNAPSSKK RALQNLTFQS KPKPKPTHGP KKNRTDSQTL 240 DHIMAERKRR QELTERFIAL SATIPALKKT DKSSILREAI NYVKQLQERV TELEQQNKRG 300 KDSIIILKRT DLYANNEDNT SSETNSEDCC RTSEMLPDIE ARMMENEVLI EIHCEKEDGV 360 ELKILEQLEN LHLSVTGSSV LPFGNSTLGI TIIAQMGDAY RTTVNDLVKN LRHVLSNHMT 420 MNPDPY

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MAITPFSINA KQIVLLTVKR VVGIEQQALY SQTHDSMNSS SSLGNINFEL TTTQGTKRVR  60
TSSETQDHIM SERRRRQQMA ERFIALSAII PGLKKELDDE KDPLELEECH TEDEEFLRDI  120
LQQPAVSSES ESQPFVQLTA AAVTDGGSSL SSDEMVGSER PGKRTRLSSS PQPRAYILSF  180
DNSTIIPATP QPQPQPHARS SKSNAPSSKK RALQNLTFQS KPKPKPTHGP KKNRTDSQTL  240
DHIMAERKRR QELTERFIAL SATIPALKKT DKSSILREAI NYVKQLQERV TELEQQNKRG  300
KDSIIILKRT DLYANNEDNT SSETNSEDCC RTSEMLPDIE ARMMENEVLI EIHCEKEDGV  360
ELKILEQLEN LHLSVTGSSV LPFGNSTLGI TIIAQMGDAY RTTVNDLVKN LRHVLSNHMT  420
MNPDPY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	246	251	ERKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	5e-42	bHLH family protein