PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343415.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 441aa    MW: 49644.9 Da    PI: 5.1653
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS320.24.3e-98654403374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL ecA+a+s++d +++++lL+ l+elasp+gd  q+la+yf++AL  + ++s++++yk+l++ ++++++ +++ +    f+evsP+ +f+h++
  XP_027343415.1  65 KLLRECARAISERDSTKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTLSSVAEKNHSFDSARKLILKFQEVSPWTTFGHVA 159
                     6899**********************************************************9999985554444444445************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                      N aIlea+ege+++Hi+D++ + ++QWp+Ll+aLa+R++++p+l++T+v+  +s+    ++e+g+r++kfA+ +gvpfefnv+  + l+ l+ e
  XP_027343415.1 160 SNGAILEALEGETKLHIVDISNTLCTQWPTLLEALATRNDETPHLKLTVVALTASVVGSVMREVGQRMEKFARLMGVPFEFNVI--SGLNHLTKE 252
                     ****************************************************9999**************************96..99******* PP

            GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerikv 285
                      L v+++Ea+aVn++ +l r+      +e+ r+++++++ksl Pkvv+vve+ead   +s +F++ f e+l++y+  f++le+++p++s+er  +
  XP_027343415.1 253 GLGVQEDEAIAVNCAGALRRVE-----VEE-REALIRVFKSLGPKVVTVVEEEADFcsSSDDFVKSFEECLKFYTLYFEMLEESFPPTSNERLIL 341
                     ********************97.....444.889*********************8767789********************************* PP

            GRAS 286 Erellgreivnvvacegaerr.........erhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve..eesgslvlgWkdrpLv 368
                     Ere  +r+iv v+ac+ +e +         er+e+  +W+erl+++ F+p+ +s+++++++k+ll++++ ++  +v   ++++ ++l+Wk++p+v
  XP_027343415.1 342 ERE-CSRSIVRVLACSSDEFEdgellgdccERRERGTQWSERLRNS-FSPAGFSDDVVDDVKALLKRYQpGWSLMVSqgDDHHGIYLTWKEEPVV 434
                     ***.89*********99874333344444489***********986.**********************76666666566788899********* PP

            GRAS 369 svSaWr 374
                     ++SaW+
  XP_027343415.1 435 WASAWK 440
                     *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MDITPYTSKK LTSPHLSVHS NNQHQNNIVD EAAAIDMHRS NHSHTSTSRS SDSSEPSEDG  60
KWAPKLLREC ARAISERDST KIHHLLWMLN ELASPYGDCD QKLASYFLQA LFCKATESGQ  120
RCYKTLSSVA EKNHSFDSAR KLILKFQEVS PWTTFGHVAS NGAILEALEG ETKLHIVDIS  180
NTLCTQWPTL LEALATRNDE TPHLKLTVVA LTASVVGSVM REVGQRMEKF ARLMGVPFEF  240
NVISGLNHLT KEGLGVQEDE AIAVNCAGAL RRVEVEEREA LIRVFKSLGP KVVTVVEEEA  300
DFCSSSDDFV KSFEECLKFY TLYFEMLEES FPPTSNERLI LERECSRSIV RVLACSSDEF  360
EDGELLGDCC ERRERGTQWS ERLRNSFSPA GFSDDVVDDV KALLKRYQPG WSLMVSQGDD  420
HHGIYLTWKE EPVVWASAWK P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-137GRAS family protein