PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343404.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 182aa    MW: 20562.8 Da    PI: 6.7009
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157.4e-053254123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ Fs+   L  H++ H
  XP_027343404.1 32 YECNFCKRGFSNAQALGGHMNIH 54
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MESNDHIHDT TSEKATDGDG ELDGNKVMRR SYECNFCKRG FSNAQALGGH MNIHRKDKAK  60
IKHTSSNSNH TQPPYSLDIH HKVKPSVEKQ SNPNWPWHGV DSSKDETHVV HIKKLPFFFD  120
SQMIGCETQK PQYCQISEEN IGIESEMAFP SSHGSSSELD LELRLGPHPE DSSLVTGTRK  180
FF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.12e-15C2H2 family protein