PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343365.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 301aa MW: 34621.3 Da PI: 7.9794

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.9	1.8e-05	138	157	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+k+F+r n++ H+ XP_027343365.1 138 FACSICSKTFNRYNNMQMHM 157 78*****************9 PP
2	zf-C2H2	11.6	0.00088	222	244	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C k+F k + ++H +++ XP_027343365.1 222 FMCRKCAKTFAVKGDWRTHEKNC 244 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MSLRECNVED KNLYLQTPTF IEWLKPSSSL TTSISSSPSL TRHELVHETI QFFPFKEDHG 60 VQKEGSEVKE EKVEQVTVAL HIGLPNTRGP DDDDDDEKKV FLVKEEEPLK SFHECSFNQE 120 RRFWIPTPSQ ILVGPMQFAC SICSKTFNRY NNMQMHMWGH GSEFRKGPDS LRGTQPAAML 180 RLPCYCCAQG CKNNINHPRA KPLKDFRTLQ THYKRKHGAK PFMCRKCAKT FAVKGDWRTH 240 EKNCGKLWYC TCGSDFKHKR SLKDHIRSFG KGHSPHPSLE GMVEDEKECI TGSDEDEVAH 300 T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-110	C2H2 family protein