PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343309.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 285aa MW: 32253.3 Da PI: 10.418

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.6	2.5e-16	28	118	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ + +Li+a e+ +l+rg+l++++W+ev++++ + + +r+ +qCk++++ l+k+yk +k++ ++ +s + +p+f ql+ XP_027343309.1 28 CWSEDATFTLIDAWGERYLELNRGNLRQKHWQEVADAVnarhghVSSKAHRTDVQCKNRIDTLKKKYKIEKARVSDA-GDSATAWPFFLQLD 118 7***********************************99888888899********************9996.677779***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MDSLAGAPPH IVAPLSSRPS PFPGREDCWS EDATFTLIDA WGERYLELNR GNLRQKHWQE 60 VADAVNARHG HVSSKAHRTD VQCKNRIDTL KKKYKIEKAR VSDAGDSATA WPFFLQLDFL 120 IGDTFPAKKP SPPAITGNRW NTPPAKSPSW ALVPVGPRSG TQKRPAGKAT SPASVDNSYF 180 RRNFSAFAAA EADSENSNGS KWSSESKKRR KRKREFGYRD VAEALERFGE IYERVEEAKQ 240 RQMVELEKQR MQFAKDLECQ RMQLFMETQV RLQRINASKR SSAPG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	211	KKRRK
2	207	213	KKRRKRK
3	208	214	KKRRKRK
4	209	214	RRKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	1e-52	Trihelix family protein